Module molcrawl.evaluation.gpt2

GPT-2 model evaluation scripts.

Sub-modules

molcrawl.evaluation.gpt2.clinvar_data_preparation
molcrawl.evaluation.gpt2.clinvar_evaluation
molcrawl.evaluation.gpt2.clinvar_visualization
molcrawl.evaluation.gpt2.cosmic_data_preparation

COSMIC data download/preprocessing script …

molcrawl.evaluation.gpt2.cosmic_evaluation
molcrawl.evaluation.gpt2.cosmic_visualization
molcrawl.evaluation.gpt2.extract_random_clinvar_samples
molcrawl.evaluation.gpt2.molecule_nat_lang_evaluation
molcrawl.evaluation.gpt2.molecule_nat_lang_visualization
molcrawl.evaluation.gpt2.omim_data_preparation

OMIM Data Preparation Script …

molcrawl.evaluation.gpt2.omim_evaluation
molcrawl.evaluation.gpt2.omim_real_data_processor

OMIM Real Data Processor …

molcrawl.evaluation.gpt2.omim_visualization
molcrawl.evaluation.gpt2.prepare_clinvar_sequences
molcrawl.evaluation.gpt2.protein_classification_data_preparation
molcrawl.evaluation.gpt2.protein_classification_evaluation
molcrawl.evaluation.gpt2.protein_classification_visualization
molcrawl.evaluation.gpt2.proteingym_data_preparation

ProteinGym dataset download and preprocessing utility …

molcrawl.evaluation.gpt2.proteingym_evaluation
molcrawl.evaluation.gpt2.proteingym_visualization